scikit-bio
skbio.io
skbio.sequence
skbio.alignment
skbio.tree
skbio.diversity
skbio.stats
skbio.embedding
skbio.table
skbio.metadata
skbio.workflow
skbio.util
skbio.stats.distance
skbio.stats.ordination
skbio.stats.composition
skbio.stats.evolve
skbio.stats.gradient
skbio.stats.power
f_matrix()
Compute F matrix from E matrix.
Centring step: for each element, the mean of the corresponding row and column are substracted, and the mean of the whole matrix is added. Eq. 9.21 in Legendre & Legendre 1998.
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skbio.stats.ordination.e_matrix
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Composition Statistics (skbio.stats.composition)